Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm14441-201ENSMUST00000121960 540 ntBASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm27046-201ENSMUST00000182160 463 ntBASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm5186-201ENSMUST00000218781 920 ntBASIC10.91□□□□□ -0.66
Hoxc5P32043 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Erich3-203ENSMUST00000189969 3460 ntBASIC10.91□□□□□ -0.66
Hoxc5P32043 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.91□□□□□ -0.66
Hoxc5P32043 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc5P32043 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc5P32043 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc5P32043 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.9□□□□□ -0.66
Hoxc5P32043 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.9□□□□□ -0.66
Hoxc5P32043 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Gm21769-201ENSMUST00000211922 111 ntBASIC10.9□□□□□ -0.66
Hoxc5P32043 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.9□□□□□ -0.66
Hoxc5P32043 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc5P32043 Btrc-209ENSMUST00000224478 2194 ntBASIC10.9□□□□□ -0.66
Hoxc5P32043 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc5P32043 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxc5P32043 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.9□□□□□ -0.67
Hoxc5P32043 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Hoxc5P32043 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxc5P32043 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Hoxc5P32043 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxc5P32043 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxc5P32043 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxc5P32043 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.9□□□□□ -0.67
Hoxc5P32043 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Hoxc5P32043 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms