Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Mmp3P28862 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.56□□□□□ -0.4
Mmp3P28862 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.56□□□□□ -0.4
Mmp3P28862 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Mmp3P28862 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.56□□□□□ -0.4
Mmp3P28862 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.56□□□□□ -0.4
Mmp3P28862 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.56□□□□□ -0.4
Mmp3P28862 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.56□□□□□ -0.4
Mmp3P28862 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp3P28862 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Mmp3P28862 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Mmp3P28862 Gm13937-201ENSMUST00000121000 988 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Gm25072-201ENSMUST00000175233 235 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Gm23153-201ENSMUST00000175323 313 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Gm7741-201ENSMUST00000181445 989 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.55□□□□□ -0.4
Mmp3P28862 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Gm38314-201ENSMUST00000195709 625 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Gm17825-201ENSMUST00000206836 794 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp3P28862 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Mmp3P28862 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp3P28862 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.55□□□□□ -0.4
Mmp3P28862 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Mmp3P28862 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Mmp3P28862 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp3P28862 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp3P28862 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Mmp3P28862 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp3P28862 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Mmp3P28862 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Mmp3P28862 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Mmp3P28862 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Mmp3P28862 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Mmp3P28862 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.54□□□□□ -0.4
Mmp3P28862 Gm12795-201ENSMUST00000117594 539 ntBASIC12.54□□□□□ -0.4
Mmp3P28862 Gm11700-201ENSMUST00000119409 403 ntBASIC12.54□□□□□ -0.4
Mmp3P28862 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.54□□□□□ -0.4
Mmp3P28862 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Mmp3P28862 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Mmp3P28862 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.54□□□□□ -0.4
Mmp3P28862 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp3P28862 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.54□□□□□ -0.4
Mmp3P28862 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.54□□□□□ -0.4
Mmp3P28862 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.54□□□□□ -0.4
Mmp3P28862 Gm44158-201ENSMUST00000203881 505 ntBASIC12.54□□□□□ -0.4
Mmp3P28862 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.54□□□□□ -0.4
Mmp3P28862 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.54□□□□□ -0.4
Mmp3P28862 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.54□□□□□ -0.4
Mmp3P28862 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms