Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.74□□□□□ -0.53
Nckap1P28660 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Gm11783-201ENSMUST00000119549 885 ntBASIC11.74□□□□□ -0.53
Nckap1P28660 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.74□□□□□ -0.53
Nckap1P28660 Gm23771-201ENSMUST00000178702 110 ntBASIC11.74□□□□□ -0.53
Nckap1P28660 Gm4654-201ENSMUST00000183305 982 ntBASIC11.74□□□□□ -0.53
Nckap1P28660 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Gm44506-201ENSMUST00000206278 965 ntBASIC11.74□□□□□ -0.53
Nckap1P28660 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.74□□□□□ -0.53
Nckap1P28660 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nckap1P28660 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Nckap1P28660 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Nckap1P28660 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.74□□□□□ -0.53
Nckap1P28660 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nckap1P28660 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nckap1P28660 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nckap1P28660 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nckap1P28660 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.73□□□□□ -0.53
Nckap1P28660 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.73□□□□□ -0.53
Nckap1P28660 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.73□□□□□ -0.53
Nckap1P28660 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nckap1P28660 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.73□□□□□ -0.53
Nckap1P28660 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.73□□□□□ -0.53
Nckap1P28660 Gm9358-201ENSMUST00000183067 927 ntBASIC11.73□□□□□ -0.53
Nckap1P28660 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.73□□□□□ -0.53
Nckap1P28660 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nckap1P28660 Gm44124-201ENSMUST00000204159 472 ntBASIC11.73□□□□□ -0.53
Nckap1P28660 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.73□□□□□ -0.53
Nckap1P28660 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.73□□□□□ -0.53
Nckap1P28660 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.73□□□□□ -0.53
Nckap1P28660 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nckap1P28660 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nckap1P28660 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nckap1P28660 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nckap1P28660 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.72□□□□□ -0.53
Nckap1P28660 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nckap1P28660 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm11949-201ENSMUST00000117640 372 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Gm12036-201ENSMUST00000120008 530 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.72□□□□□ -0.53
Nckap1P28660 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms