Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ccl6P27784 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccl6P27784 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccl6P27784 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccl6P27784 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.16□□□□□ -0.94
Ccl6P27784 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ccl6P27784 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccl6P27784 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ccl6P27784 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ccl6P27784 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ccl6P27784 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccl6P27784 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.15□□□□□ -0.94
Ccl6P27784 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.15□□□□□ -0.94
Ccl6P27784 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Ccl6P27784 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Ccl6P27784 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Ccl6P27784 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ccl6P27784 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.15□□□□□ -0.94
Ccl6P27784 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.15□□□□□ -0.94
Ccl6P27784 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.15□□□□□ -0.94
Ccl6P27784 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.15□□□□□ -0.94
Ccl6P27784 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.15□□□□□ -0.94
Ccl6P27784 Gm13097-201ENSMUST00000210722 397 ntBASIC9.15□□□□□ -0.94
Ccl6P27784 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Ccl6P27784 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Ccl6P27784 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.15□□□□□ -0.94
Ccl6P27784 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.15□□□□□ -0.94
Ccl6P27784 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ccl6P27784 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccl6P27784 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ccl6P27784 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ccl6P27784 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ccl6P27784 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.15□□□□□ -0.95
Ccl6P27784 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.15□□□□□ -0.95
Ccl6P27784 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ccl6P27784 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ccl6P27784 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ccl6P27784 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ccl6P27784 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ccl6P27784 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.95
Ccl6P27784 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Ccl6P27784 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.14□□□□□ -0.95
Ccl6P27784 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ccl6P27784 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm25668-201ENSMUST00000157700 129 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Gm26361-201ENSMUST00000158868 186 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.14□□□□□ -0.95
Ccl6P27784 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms