Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TP20293 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.11□□□□□ -0.63
TP20293 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.11□□□□□ -0.63
TP20293 Gm45224-201ENSMUST00000208203 414 ntBASIC11.11□□□□□ -0.63
TP20293 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.11□□□□□ -0.63
TP20293 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.11□□□□□ -0.63
TP20293 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TP20293 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
TP20293 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
TP20293 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.11□□□□□ -0.63
TP20293 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TP20293 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.1□□□□□ -0.63
TP20293 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TP20293 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.1□□□□□ -0.63
TP20293 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.1□□□□□ -0.63
TP20293 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.1□□□□□ -0.63
TP20293 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.1□□□□□ -0.63
TP20293 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TP20293 Gm12036-201ENSMUST00000120008 530 ntBASIC11.1□□□□□ -0.63
TP20293 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TP20293 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.1□□□□□ -0.63
TP20293 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm43962-201ENSMUST00000203898 190 ntBASIC11.1□□□□□ -0.63
TP20293 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.1□□□□□ -0.63
TP20293 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.1□□□□□ -0.63
TP20293 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.1□□□□□ -0.63
TP20293 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm5455-201ENSMUST00000058710 715 ntBASIC11.1□□□□□ -0.63
TP20293 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.1□□□□□ -0.63
TP20293 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.1□□□□□ -0.63
TP20293 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.1□□□□□ -0.63
TP20293 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.1□□□□□ -0.63
TP20293 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TP20293 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.09□□□□□ -0.63
TP20293 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TP20293 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.09□□□□□ -0.63
TP20293 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.09□□□□□ -0.63
TP20293 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.09□□□□□ -0.63
TP20293 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.09□□□□□ -0.63
TP20293 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TP20293 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.09□□□□□ -0.63
TP20293 Gm11511-201ENSMUST00000118146 540 ntBASIC11.09□□□□□ -0.63
TP20293 Gm5419-201ENSMUST00000119301 527 ntBASIC11.09□□□□□ -0.63
TP20293 Gm15610-201ENSMUST00000120584 195 ntBASIC11.09□□□□□ -0.63
TP20293 Gm5616-201ENSMUST00000165252 384 ntBASIC11.09□□□□□ -0.63
TP20293 Gm8741-201ENSMUST00000174736 384 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms