Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VimP20152 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VimP20152 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VimP20152 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
VimP20152 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
VimP20152 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
VimP20152 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
VimP20152 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.88□□□□□ -0.51
VimP20152 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Gm12314-201ENSMUST00000118104 538 ntBASIC11.88□□□□□ -0.51
VimP20152 Gm11700-201ENSMUST00000119409 403 ntBASIC11.88□□□□□ -0.51
VimP20152 Gm13369-201ENSMUST00000119442 987 ntBASIC11.88□□□□□ -0.51
VimP20152 Gm12363-201ENSMUST00000122250 668 ntBASIC11.88□□□□□ -0.51
VimP20152 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Mir7684-201ENSMUST00000183858 60 ntBASIC11.88□□□□□ -0.51
VimP20152 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.88□□□□□ -0.51
VimP20152 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.88□□□□□ -0.51
VimP20152 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VimP20152 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
VimP20152 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.87□□□□□ -0.51
VimP20152 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.87□□□□□ -0.51
VimP20152 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VimP20152 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
VimP20152 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.87□□□□□ -0.51
VimP20152 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
VimP20152 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.87□□□□□ -0.51
VimP20152 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
VimP20152 Gm13616-201ENSMUST00000120600 222 ntBASIC11.87□□□□□ -0.51
VimP20152 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Proscos-202ENSMUST00000178990 666 ntBASIC11.87□□□□□ -0.51
VimP20152 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.87□□□□□ -0.51
VimP20152 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
VimP20152 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Gm8598-201ENSMUST00000221184 836 ntBASIC11.87□□□□□ -0.51
VimP20152 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VimP20152 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.87□□□□□ -0.51
VimP20152 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VimP20152 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VimP20152 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.86□□□□□ -0.51
VimP20152 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Syt7-204ENSMUST00000223586 1344 ntBASIC11.86□□□□□ -0.51
VimP20152 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.86□□□□□ -0.51
VimP20152 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.86□□□□□ -0.51
VimP20152 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms