Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn1P18608 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hmgn1P18608 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.72□□□□□ -0.69
Hmgn1P18608 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Gm6023-201ENSMUST00000118217 606 ntBASIC10.72□□□□□ -0.69
Hmgn1P18608 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.72□□□□□ -0.69
Hmgn1P18608 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.72□□□□□ -0.69
Hmgn1P18608 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.72□□□□□ -0.69
Hmgn1P18608 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Hmgn1P18608 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hmgn1P18608 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Gm6439-201ENSMUST00000199849 862 ntBASIC10.71□□□□□ -0.69
Hmgn1P18608 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.71□□□□□ -0.69
Hmgn1P18608 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hmgn1P18608 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.71□□□□□ -0.69
Hmgn1P18608 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmgn1P18608 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmgn1P18608 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmgn1P18608 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmgn1P18608 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmgn1P18608 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hmgn1P18608 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Hmgn1P18608 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmgn1P18608 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmgn1P18608 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hmgn1P18608 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.7□□□□□ -0.7
Hmgn1P18608 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hmgn1P18608 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.7□□□□□ -0.7
Hmgn1P18608 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Hmgn1P18608 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms