Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.54□□□□□ -0.88
Cdx1P18111 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.54□□□□□ -0.88
Cdx1P18111 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm29396-201ENSMUST00000185659 716 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm44069-201ENSMUST00000204898 506 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Olfr284-202ENSMUST00000206647 966 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC9.54□□□□□ -0.88
Cdx1P18111 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cdx1P18111 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.54□□□□□ -0.88
Cdx1P18111 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Cdx1P18111 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.54□□□□□ -0.88
Cdx1P18111 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cdx1P18111 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cdx1P18111 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cdx1P18111 Gm16202-201ENSMUST00000117532 544 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Gm11637-201ENSMUST00000120601 592 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.53□□□□□ -0.88
Cdx1P18111 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Gm25261-201ENSMUST00000157416 134 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Gm7029-201ENSMUST00000173226 450 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Gm7584-201ENSMUST00000175829 940 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.53□□□□□ -0.88
Cdx1P18111 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.53□□□□□ -0.88
Cdx1P18111 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.53□□□□□ -0.88
Cdx1P18111 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cdx1P18111 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.53□□□□□ -0.88
Cdx1P18111 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cdx1P18111 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.53□□□□□ -0.88
Cdx1P18111 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.53□□□□□ -0.88
Cdx1P18111 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cdx1P18111 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cdx1P18111 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.52□□□□□ -0.88
Cdx1P18111 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.52□□□□□ -0.88
Cdx1P18111 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cdx1P18111 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cdx1P18111 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Cdx1P18111 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cdx1P18111 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cdx1P18111 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Cdx1P18111 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Cdx1P18111 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cdx1P18111 Gm15236-201ENSMUST00000117309 379 ntBASIC9.52□□□□□ -0.89
Cdx1P18111 Gm13123-201ENSMUST00000122173 492 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms