Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmga1P17095 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmga1P17095 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmga1P17095 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmga1P17095 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmga1P17095 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmga1P17095 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.97□□□□□ -0.49
Hmga1P17095 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmga1P17095 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmga1P17095 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Hmga1P17095 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hmga1P17095 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.96□□□□□ -0.49
Hmga1P17095 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.96□□□□□ -0.49
Hmga1P17095 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Gm4294-201ENSMUST00000105169 614 ntBASIC11.96□□□□□ -0.49
Hmga1P17095 Gm15374-201ENSMUST00000119313 844 ntBASIC11.96□□□□□ -0.49
Hmga1P17095 Gm13937-201ENSMUST00000121000 988 ntBASIC11.96□□□□□ -0.49
Hmga1P17095 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Hmga1P17095 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.96□□□□□ -0.49
Hmga1P17095 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.96□□□□□ -0.49
Hmga1P17095 Gm5996-201ENSMUST00000211110 718 ntBASIC11.96□□□□□ -0.49
Hmga1P17095 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.96□□□□□ -0.49
Hmga1P17095 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.96□□□□□ -0.49
Hmga1P17095 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.96□□□□□ -0.49
Hmga1P17095 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hmga1P17095 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hmga1P17095 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmga1P17095 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hmga1P17095 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.96□□□□□ -0.5
Hmga1P17095 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.96□□□□□ -0.5
Hmga1P17095 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmga1P17095 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Hmga1P17095 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Hmga1P17095 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hmga1P17095 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Gm26013-201ENSMUST00000104404 119 ntBASIC11.95□□□□□ -0.5
Hmga1P17095 Gm15329-201ENSMUST00000121408 155 ntBASIC11.95□□□□□ -0.5
Hmga1P17095 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.95□□□□□ -0.5
Hmga1P17095 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.95□□□□□ -0.5
Hmga1P17095 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.95□□□□□ -0.5
Hmga1P17095 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.95□□□□□ -0.5
Hmga1P17095 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.95□□□□□ -0.5
Hmga1P17095 Gm37826-201ENSMUST00000195329 322 ntBASIC11.95□□□□□ -0.5
Hmga1P17095 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.95□□□□□ -0.5
Hmga1P17095 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hmga1P17095 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.95□□□□□ -0.5
Hmga1P17095 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmga1P17095 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms