Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm5700-201ENSMUST00000191483 989 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 AC140368.1-202ENSMUST00000226131 658 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm26448-201ENSMUST00000082446 203 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Mir326-201ENSMUST00000083637 95 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm37785-201ENSMUST00000195783 2408 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm42822-201ENSMUST00000200507 1529 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm12196-201ENSMUST00000120954 262 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm16285-201ENSMUST00000162999 347 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm5733-201ENSMUST00000190232 939 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm37866-201ENSMUST00000191950 696 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.92□□□□□ -0.5
Hoxb3P09026 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.92□□□□□ -0.5
Hoxb3P09026 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Hoxb3P09026 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxb3P09026 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms