Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.12□□□□□ -0.63
ApoeP08226 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
ApoeP08226 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
ApoeP08226 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.12□□□□□ -0.63
ApoeP08226 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
ApoeP08226 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.12□□□□□ -0.63
ApoeP08226 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.12□□□□□ -0.63
ApoeP08226 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.12□□□□□ -0.63
ApoeP08226 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.12□□□□□ -0.63
ApoeP08226 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.12□□□□□ -0.63
ApoeP08226 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.12□□□□□ -0.63
ApoeP08226 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.12□□□□□ -0.63
ApoeP08226 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.12□□□□□ -0.63
ApoeP08226 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
ApoeP08226 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
ApoeP08226 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ApoeP08226 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.11□□□□□ -0.63
ApoeP08226 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ApoeP08226 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.11□□□□□ -0.63
ApoeP08226 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ApoeP08226 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.11□□□□□ -0.63
ApoeP08226 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ApoeP08226 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.11□□□□□ -0.63
ApoeP08226 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Gm14832-201ENSMUST00000121289 322 ntBASIC11.11□□□□□ -0.63
ApoeP08226 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.11□□□□□ -0.63
ApoeP08226 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.11□□□□□ -0.63
ApoeP08226 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Gm5035-201ENSMUST00000215581 927 ntBASIC11.11□□□□□ -0.63
ApoeP08226 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.11□□□□□ -0.63
ApoeP08226 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ApoeP08226 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
ApoeP08226 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.1□□□□□ -0.63
ApoeP08226 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.1□□□□□ -0.63
ApoeP08226 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.1□□□□□ -0.63
ApoeP08226 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.1□□□□□ -0.63
ApoeP08226 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ApoeP08226 Gm25261-201ENSMUST00000157416 134 ntBASIC11.1□□□□□ -0.63
ApoeP08226 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
ApoeP08226 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms