Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TnfP06804 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.46□□□□□ -0.41
TnfP06804 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.46□□□□□ -0.41
TnfP06804 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.46□□□□□ -0.41
TnfP06804 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.46□□□□□ -0.41
TnfP06804 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.46□□□□□ -0.41
TnfP06804 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.46□□□□□ -0.41
TnfP06804 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Gm16071-201ENSMUST00000119589 793 ntBASIC12.46□□□□□ -0.41
TnfP06804 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.46□□□□□ -0.41
TnfP06804 Gm17826-201ENSMUST00000189720 798 ntBASIC12.46□□□□□ -0.41
TnfP06804 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.46□□□□□ -0.41
TnfP06804 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TnfP06804 Gm44980-201ENSMUST00000205826 314 ntBASIC12.46□□□□□ -0.41
TnfP06804 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.46□□□□□ -0.41
TnfP06804 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TnfP06804 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.46□□□□□ -0.42
TnfP06804 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.46□□□□□ -0.42
TnfP06804 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.46□□□□□ -0.42
TnfP06804 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
TnfP06804 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TnfP06804 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
TnfP06804 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.45□□□□□ -0.42
TnfP06804 Gm12419-201ENSMUST00000116649 636 ntBASIC12.45□□□□□ -0.42
TnfP06804 Gm16166-201ENSMUST00000118291 787 ntBASIC12.45□□□□□ -0.42
TnfP06804 Gm11700-201ENSMUST00000119409 403 ntBASIC12.45□□□□□ -0.42
TnfP06804 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.45□□□□□ -0.42
TnfP06804 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TnfP06804 Gm38314-201ENSMUST00000195709 625 ntBASIC12.45□□□□□ -0.42
TnfP06804 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.45□□□□□ -0.42
TnfP06804 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.45□□□□□ -0.42
TnfP06804 Gm44545-201ENSMUST00000208262 746 ntBASIC12.45□□□□□ -0.42
TnfP06804 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.45□□□□□ -0.42
TnfP06804 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.45□□□□□ -0.42
TnfP06804 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Gm4978-201ENSMUST00000071565 801 ntBASIC12.45□□□□□ -0.42
TnfP06804 Olfr584-201ENSMUST00000098210 964 ntBASIC12.45□□□□□ -0.42
TnfP06804 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TnfP06804 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.45□□□□□ -0.42
TnfP06804 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
TnfP06804 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TnfP06804 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.45□□□□□ -0.42
TnfP06804 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TnfP06804 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TnfP06804 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.45□□□□□ -0.42
TnfP06804 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TnfP06804 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.45□□□□□ -0.42
TnfP06804 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.44□□□□□ -0.42
TnfP06804 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
TnfP06804 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 333.6 ms