Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
IghmP01872 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.98□□□□□ -0.65
IghmP01872 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.98□□□□□ -0.65
IghmP01872 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
IghmP01872 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
IghmP01872 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.98□□□□□ -0.65
IghmP01872 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IghmP01872 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.97□□□□□ -0.65
IghmP01872 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.97□□□□□ -0.65
IghmP01872 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
IghmP01872 Gm22323-201ENSMUST00000103832 109 ntBASIC10.97□□□□□ -0.65
IghmP01872 Gm11500-201ENSMUST00000118237 601 ntBASIC10.97□□□□□ -0.65
IghmP01872 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.97□□□□□ -0.65
IghmP01872 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Gm20482-202ENSMUST00000174729 825 ntBASIC10.97□□□□□ -0.65
IghmP01872 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.97□□□□□ -0.65
IghmP01872 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.97□□□□□ -0.65
IghmP01872 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.97□□□□□ -0.65
IghmP01872 Gm43966-201ENSMUST00000203301 612 ntBASIC10.97□□□□□ -0.65
IghmP01872 Gm9797-202ENSMUST00000218003 294 ntBASIC10.97□□□□□ -0.65
IghmP01872 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.97□□□□□ -0.65
IghmP01872 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.97□□□□□ -0.65
IghmP01872 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.97□□□□□ -0.65
IghmP01872 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.97□□□□□ -0.65
IghmP01872 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.97□□□□□ -0.65
IghmP01872 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
IghmP01872 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Erich3-203ENSMUST00000189969 3460 ntBASIC10.97□□□□□ -0.65
IghmP01872 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IghmP01872 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
IghmP01872 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.96□□□□□ -0.65
IghmP01872 Gm14381-201ENSMUST00000122105 414 ntBASIC10.96□□□□□ -0.65
IghmP01872 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.96□□□□□ -0.65
IghmP01872 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.96□□□□□ -0.65
IghmP01872 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.96□□□□□ -0.65
IghmP01872 Gm37259-201ENSMUST00000193903 849 ntBASIC10.96□□□□□ -0.65
IghmP01872 AY036118-201ENSMUST00000200021 923 ntBASIC10.96□□□□□ -0.65
IghmP01872 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms