Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.06□□□□□ -0.96
MsmbO08540 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
MsmbO08540 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.06□□□□□ -0.96
MsmbO08540 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.06□□□□□ -0.96
MsmbO08540 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.06□□□□□ -0.96
MsmbO08540 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
MsmbO08540 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.05□□□□□ -0.96
MsmbO08540 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.05□□□□□ -0.96
MsmbO08540 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.05□□□□□ -0.96
MsmbO08540 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.05□□□□□ -0.96
MsmbO08540 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
MsmbO08540 Gm4310-201ENSMUST00000177847 889 ntBASIC9.05□□□□□ -0.96
MsmbO08540 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Gm5733-201ENSMUST00000190232 939 ntBASIC9.05□□□□□ -0.96
MsmbO08540 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.05□□□□□ -0.96
MsmbO08540 Gm29787-201ENSMUST00000222129 849 ntBASIC9.05□□□□□ -0.96
MsmbO08540 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
MsmbO08540 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
MsmbO08540 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
MsmbO08540 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MsmbO08540 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.04□□□□□ -0.96
MsmbO08540 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
MsmbO08540 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Gm11331-201ENSMUST00000119764 288 ntBASIC9.04□□□□□ -0.96
MsmbO08540 Gm8199-201ENSMUST00000121323 823 ntBASIC9.04□□□□□ -0.96
MsmbO08540 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms