Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Lect2-202ENSMUST00000225183 823 ntBASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm12490-201ENSMUST00000120255 560 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm24845-201ENSMUST00000158034 109 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm25043-201ENSMUST00000158604 212 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm42627-201ENSMUST00000197347 224 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Rgr-203ENSMUST00000225070 4704 ntBASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.69□□□□□ -0.7
Shisa8J3QNX5 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm11439-201ENSMUST00000118598 409 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm5419-201ENSMUST00000119301 527 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm24548-201ENSMUST00000158650 108 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm5745-201ENSMUST00000183748 313 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm5186-201ENSMUST00000218781 920 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms