Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cpsf4lE9Q2N0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Paupar-201ENSMUST00000194826 3482 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm13035-201ENSMUST00000117496 342 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm11450-201ENSMUST00000121144 333 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm8199-201ENSMUST00000121323 823 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm18734-201ENSMUST00000172937 808 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm8815-201ENSMUST00000173809 620 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm25732-201ENSMUST00000175168 60 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Mir8093-201ENSMUST00000185043 137 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm4482-201ENSMUST00000200876 742 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm45113-201ENSMUST00000207518 165 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Gm6867-201ENSMUST00000219165 425 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cpsf4lE9Q2N0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Gm11783-201ENSMUST00000119549 885 ntBASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.93□□□□□ -0.82
Cpsf4lE9Q2N0 Gm13461-201ENSMUST00000120980 662 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms