Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm17764-201ENSMUST00000185925 391 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm5982-201ENSMUST00000196234 512 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm13215-201ENSMUST00000117559 472 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm14071-201ENSMUST00000117817 509 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm23563-201ENSMUST00000174900 251 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Mir7115-201ENSMUST00000184275 64 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 AC125223.1-201ENSMUST00000224004 749 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm9790-201ENSMUST00000054148 288 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm45110-201ENSMUST00000205704 1402 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm12463-201ENSMUST00000118271 849 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm13543-201ENSMUST00000121230 796 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm24352-201ENSMUST00000158966 125 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm43674-201ENSMUST00000196313 791 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gm10254-201ENSMUST00000052888 867 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a3E9PWQ3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm15258-201ENSMUST00000153801 741 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms