Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Mir6990-201ENSMUST00000183724 91 ntBASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Gm17971-201ENSMUST00000190239 806 ntBASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Gm42550-201ENSMUST00000201553 960 ntBASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Smco4Q9JIS3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gm28630-201ENSMUST00000187806 498 ntBASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gm21362-201ENSMUST00000194272 928 ntBASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gm10254-201ENSMUST00000052888 867 ntBASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.36□□□□□ -0.91
Smco4Q9JIS3 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms