Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm7857-201ENSMUST00000117957 358 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm3332-201ENSMUST00000189337 928 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm19208-201ENSMUST00000213861 912 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Gm270-201ENSMUST00000223010 976 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp2aQ9DB34 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.27□□□□□ -0.44
Chmp2aQ9DB34 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gm12266-201ENSMUST00000120311 962 ntBASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gm11660-201ENSMUST00000120955 412 ntBASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gm25881-201ENSMUST00000157783 103 ntBASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gm17040-202ENSMUST00000170597 889 ntBASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms