Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.46■□□□□ 0.07
U2af1Q9D883 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.46■□□□□ 0.07
U2af1Q9D883 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
U2af1Q9D883 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
U2af1Q9D883 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
U2af1Q9D883 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
U2af1Q9D883 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
U2af1Q9D883 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
U2af1Q9D883 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
U2af1Q9D883 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
U2af1Q9D883 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
U2af1Q9D883 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
U2af1Q9D883 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
U2af1Q9D883 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
U2af1Q9D883 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Gm11700-201ENSMUST00000119409 403 ntBASIC15.45■□□□□ 0.06
U2af1Q9D883 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Gm5523-201ENSMUST00000180415 997 ntBASIC15.45■□□□□ 0.06
U2af1Q9D883 Mir8093-201ENSMUST00000185043 137 ntBASIC15.45■□□□□ 0.06
U2af1Q9D883 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.45■□□□□ 0.06
U2af1Q9D883 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.45■□□□□ 0.06
U2af1Q9D883 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
U2af1Q9D883 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
U2af1Q9D883 CT573086.2-201ENSMUST00000227277 4992 ntBASIC15.45■□□□□ 0.06
U2af1Q9D883 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.44■□□□□ 0.06
U2af1Q9D883 Gm22920-201ENSMUST00000102175 109 ntBASIC15.44■□□□□ 0.06
U2af1Q9D883 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Gm14263-201ENSMUST00000117955 746 ntBASIC15.44■□□□□ 0.06
U2af1Q9D883 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Gm12176-201ENSMUST00000121420 875 ntBASIC15.44■□□□□ 0.06
U2af1Q9D883 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
U2af1Q9D883 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Gm4726-201ENSMUST00000135604 736 ntBASIC15.44■□□□□ 0.06
U2af1Q9D883 Gm6019-201ENSMUST00000148369 736 ntBASIC15.44■□□□□ 0.06
U2af1Q9D883 Gm8459-201ENSMUST00000162504 760 ntBASIC15.44■□□□□ 0.06
U2af1Q9D883 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
U2af1Q9D883 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
U2af1Q9D883 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Gm24844-201ENSMUST00000158679 127 ntBASIC15.43■□□□□ 0.06
U2af1Q9D883 Gm3150-201ENSMUST00000166418 204 ntBASIC15.43■□□□□ 0.06
U2af1Q9D883 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Gm38314-201ENSMUST00000195709 625 ntBASIC15.43■□□□□ 0.06
U2af1Q9D883 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.43■□□□□ 0.06
U2af1Q9D883 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.43■□□□□ 0.06
U2af1Q9D883 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.43■□□□□ 0.06
U2af1Q9D883 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.43■□□□□ 0.06
U2af1Q9D883 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms