Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Rgr-203ENSMUST00000225070 4704 ntBASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rpa3Q9CQ71 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm23596-201ENSMUST00000104304 132 ntBASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm11509-201ENSMUST00000117358 325 ntBASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Rps4l-202ENSMUST00000204242 789 ntBASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa3Q9CQ71 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gm11439-201ENSMUST00000118598 409 ntBASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gm28686-201ENSMUST00000187404 609 ntBASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gm3332-201ENSMUST00000189337 928 ntBASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa3Q9CQ71 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms