Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm9102-201ENSMUST00000219250 465 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm14441-201ENSMUST00000121960 540 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm19918-201ENSMUST00000194858 400 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm44917-201ENSMUST00000208798 520 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm18391-201ENSMUST00000217189 658 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Wbp1-209ENSMUST00000205023 716 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdh23Q99PF4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Mir598-201ENSMUST00000102094 79 ntBASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Gm6794-201ENSMUST00000203829 457 ntBASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Gm3635-201ENSMUST00000212314 354 ntBASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Gm15617-201ENSMUST00000118973 771 ntBASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Gm18621-201ENSMUST00000222677 679 ntBASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdh23Q99PF4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.6□□□□□ -0.55
Cdh23Q99PF4 CT571271.1-201ENSMUST00000227071 670 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms