Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cstf3Q99LI7 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm9192-201ENSMUST00000183221 985 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm32999-201ENSMUST00000192693 562 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm19287-201ENSMUST00000203190 358 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm4607-201ENSMUST00000206649 577 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm45865-201ENSMUST00000211815 945 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Gm5455-201ENSMUST00000058710 715 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cstf3Q99LI7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Gm11700-201ENSMUST00000119409 403 ntBASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Gm43962-201ENSMUST00000203898 190 ntBASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cstf3Q99LI7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 158.3 ms