Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gm15711-201ENSMUST00000118889 535 ntBASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gm12380-201ENSMUST00000119012 544 ntBASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Gm7003-201ENSMUST00000195089 312 ntBASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Gm8420-201ENSMUST00000097103 598 ntBASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb1Q91Y08 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm23596-201ENSMUST00000104304 132 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm15808-201ENSMUST00000119046 604 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Mir8093-201ENSMUST00000185043 137 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm3332-201ENSMUST00000189337 928 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms