Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Gm13296-201ENSMUST00000117854 997 ntBASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Gm7783-201ENSMUST00000204795 781 ntBASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Gm45224-201ENSMUST00000208203 414 ntBASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhb8Q91XZ2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Pcdhb8Q91XZ2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhb8Q91XZ2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Pcdhb8Q91XZ2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.52□□□□□ -0.56
Pcdhb8Q91XZ2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhb8Q91XZ2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhb8Q91XZ2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhb8Q91XZ2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Pcdhb8Q91XZ2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm22323-201ENSMUST00000103832 109 ntBASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm25700-201ENSMUST00000177693 110 ntBASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm9192-201ENSMUST00000183221 985 ntBASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm37259-201ENSMUST00000193903 849 ntBASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm19287-201ENSMUST00000203190 358 ntBASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb8Q91XZ2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Gm13665-201ENSMUST00000120830 528 ntBASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Gm27320-201ENSMUST00000184892 109 ntBASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Gm44487-201ENSMUST00000205145 325 ntBASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.51□□□□□ -0.57
Pcdhb8Q91XZ2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms