Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm44545-201ENSMUST00000208262 746 ntBASIC12.66□□□□□ -0.38
TraipQ8VIG6 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.66□□□□□ -0.38
TraipQ8VIG6 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.66□□□□□ -0.38
TraipQ8VIG6 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.66□□□□□ -0.38
TraipQ8VIG6 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Snora73b-201ENSMUST00000083419 205 ntBASIC12.66□□□□□ -0.38
TraipQ8VIG6 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TraipQ8VIG6 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.66□□□□□ -0.38
TraipQ8VIG6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.66□□□□□ -0.38
TraipQ8VIG6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm11246-201ENSMUST00000120880 345 ntBASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm15895-201ENSMUST00000157018 731 ntTSL 3 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm8459-201ENSMUST00000162504 760 ntBASIC12.65□□□□□ -0.38
TraipQ8VIG6 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm4654-201ENSMUST00000183305 982 ntBASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.65□□□□□ -0.38
TraipQ8VIG6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.65□□□□□ -0.38
TraipQ8VIG6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TraipQ8VIG6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.65□□□□□ -0.38
TraipQ8VIG6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.65□□□□□ -0.39
TraipQ8VIG6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
TraipQ8VIG6 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Gm44914-201ENSMUST00000207191 2720 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Gm11836-201ENSMUST00000121022 441 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Mir7076-201ENSMUST00000183519 74 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms