Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Gm26134-201ENSMUST00000178484 110 ntBASIC15.03■□□□□ -0
Chmp7Q8R1T1 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Gm37826-201ENSMUST00000195329 322 ntBASIC15.03■□□□□ -0
Chmp7Q8R1T1 Gm3017-201ENSMUST00000203603 1126 ntBASIC15.03■□□□□ -0
Chmp7Q8R1T1 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.03■□□□□ -0
Chmp7Q8R1T1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chmp7Q8R1T1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Gm18642-201ENSMUST00000206642 1400 ntBASIC15.02■□□□□ -0
Chmp7Q8R1T1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Gm42599-201ENSMUST00000201308 469 ntBASIC15.02■□□□□ -0
Chmp7Q8R1T1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Gm3619-201ENSMUST00000219947 775 ntBASIC15.02■□□□□ -0
Chmp7Q8R1T1 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp7Q8R1T1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp7Q8R1T1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp7Q8R1T1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chmp7Q8R1T1 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chmp7Q8R1T1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp7Q8R1T1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp7Q8R1T1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp7Q8R1T1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp7Q8R1T1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Gm22877-201ENSMUST00000175451 105 ntBASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Gm4900-201ENSMUST00000222046 1628 ntBASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp7Q8R1T1 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Chmp7Q8R1T1 Gm14892-201ENSMUST00000117636 267 ntBASIC15□□□□□ -0.01
Chmp7Q8R1T1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms