Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm12899-201ENSMUST00000120565 551 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm22138-201ENSMUST00000158748 128 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm27910-201ENSMUST00000185004 107 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm3793-201ENSMUST00000204973 672 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm17831-201ENSMUST00000205579 900 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
Trim68Q8K243 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.84□□□□□ -0.35
Trim68Q8K243 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim68Q8K243 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim68Q8K243 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim68Q8K243 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trim68Q8K243 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.83□□□□□ -0.35
Trim68Q8K243 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim68Q8K243 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm12857-201ENSMUST00000117678 592 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm12628-201ENSMUST00000122193 382 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Mir1901-201ENSMUST00000122616 78 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trim68Q8K243 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm23771-201ENSMUST00000178702 110 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm28686-201ENSMUST00000187404 609 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm4157-201ENSMUST00000211647 679 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim68Q8K243 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim68Q8K243 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim68Q8K243 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.83□□□□□ -0.36
Trim68Q8K243 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim68Q8K243 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.82□□□□□ -0.36
Trim68Q8K243 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim68Q8K243 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim68Q8K243 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms