Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm14109-201ENSMUST00000118814 309 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm28937-201ENSMUST00000185413 695 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm29164-201ENSMUST00000185454 1024 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm29400-201ENSMUST00000187208 695 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm28662-201ENSMUST00000188446 695 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm28251-201ENSMUST00000188835 695 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm37318-201ENSMUST00000194325 695 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm38017-201ENSMUST00000194768 695 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm37287-201ENSMUST00000195449 695 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm37793-201ENSMUST00000195548 695 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm6450-201ENSMUST00000200896 574 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm43966-201ENSMUST00000203301 612 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm43962-201ENSMUST00000203898 190 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm5705-201ENSMUST00000066241 711 ntBASIC14.5□□□□□ -0.09
Smc5Q8CG46 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smc5Q8CG46 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.49□□□□□ -0.09
Smc5Q8CG46 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.49□□□□□ -0.09
Smc5Q8CG46 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gm11660-201ENSMUST00000120955 412 ntBASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gm27501-201ENSMUST00000183599 107 ntBASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gm31256-201ENSMUST00000194705 506 ntBASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gm18935-201ENSMUST00000212692 664 ntBASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.49□□□□□ -0.09
Smc5Q8CG46 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm11500-201ENSMUST00000118237 601 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms