Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.2□□□□□ -0.14
Brf1Q8CFK2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf1Q8CFK2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Brf1Q8CFK2 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.2□□□□□ -0.14
Brf1Q8CFK2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf1Q8CFK2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf1Q8CFK2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf1Q8CFK2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.19□□□□□ -0.14
Brf1Q8CFK2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm14724-201ENSMUST00000118400 537 ntBASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm12501-201ENSMUST00000119163 529 ntBASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm8100-201ENSMUST00000182906 988 ntBASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm7940-201ENSMUST00000218195 769 ntBASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf1Q8CFK2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf1Q8CFK2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms