Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm43365-201ENSMUST00000196522 2106 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm23647-201ENSMUST00000175042 109 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Rn5s-201ENSMUST00000177555 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s108-201ENSMUST00000177575 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s121-201ENSMUST00000177589 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s146-201ENSMUST00000177889 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm22109-201ENSMUST00000177995 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm22291-201ENSMUST00000178027 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s141-201ENSMUST00000178066 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm23284-201ENSMUST00000178069 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s100-201ENSMUST00000178106 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s111-201ENSMUST00000178203 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s105-201ENSMUST00000178499 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s149-201ENSMUST00000178520 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s103-201ENSMUST00000178755 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s123-201ENSMUST00000178804 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s142-201ENSMUST00000178820 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s144-201ENSMUST00000178859 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s139-201ENSMUST00000178975 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s134-201ENSMUST00000178983 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s136-201ENSMUST00000179080 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm25018-201ENSMUST00000179081 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s104-201ENSMUST00000179107 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s113-201ENSMUST00000179143 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s133-201ENSMUST00000179275 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s117-201ENSMUST00000179431 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm25212-201ENSMUST00000179432 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s138-201ENSMUST00000179476 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s122-201ENSMUST00000179500 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s143-201ENSMUST00000179542 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s107-201ENSMUST00000179704 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm26391-201ENSMUST00000179843 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s110-201ENSMUST00000179995 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s128-201ENSMUST00000180096 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 n-R5s124-201ENSMUST00000180334 119 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm24089-201ENSMUST00000093696 109 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Id2-203ENSMUST00000222667 958 ntBASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gm7572-201ENSMUST00000182616 766 ntBASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gm43966-201ENSMUST00000203301 612 ntBASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gm5040-201ENSMUST00000218609 800 ntBASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cfap54Q8C6S9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Gm22388-201ENSMUST00000158194 248 ntBASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Gm23694-201ENSMUST00000179335 110 ntBASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cfap54Q8C6S9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms