Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rd3Q8BRE0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm22711-201ENSMUST00000116890 133 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Mir1901-201ENSMUST00000122616 78 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm28937-201ENSMUST00000185413 695 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm29400-201ENSMUST00000187208 695 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm28662-201ENSMUST00000188446 695 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm28251-201ENSMUST00000188835 695 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm37318-201ENSMUST00000194325 695 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm38017-201ENSMUST00000194768 695 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm37287-201ENSMUST00000195449 695 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm37793-201ENSMUST00000195548 695 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm6108-201ENSMUST00000208365 367 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm7940-201ENSMUST00000218195 769 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Paupar-201ENSMUST00000194826 3482 ntBASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rd3Q8BRE0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm24398-201ENSMUST00000157870 109 ntBASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm37981-201ENSMUST00000194280 535 ntBASIC12.47□□□□□ -0.41
Rd3Q8BRE0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.47□□□□□ -0.41
Rd3Q8BRE0 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Rd3Q8BRE0 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.46□□□□□ -0.41
Rd3Q8BRE0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms