Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm11451-201ENSMUST00000118946 630 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm21092-201ENSMUST00000178995 955 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm38117-201ENSMUST00000194653 939 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm44980-201ENSMUST00000205826 314 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Gm12516-201ENSMUST00000120819 385 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Gm27910-201ENSMUST00000185004 107 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Gm19087-201ENSMUST00000191430 946 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Gm43186-201ENSMUST00000198130 824 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Gm17931-201ENSMUST00000208132 634 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp1Q8BJQ2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms