Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.39□□□□□ -0.59
Rnf38Q8BI21 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
Rnf38Q8BI21 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm12241-201ENSMUST00000118330 726 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm38314-201ENSMUST00000195709 625 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm9368-201ENSMUST00000219348 831 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.38□□□□□ -0.59
Rnf38Q8BI21 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf38Q8BI21 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms