Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim6Q8BGE7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Gm13875-201ENSMUST00000120162 282 ntBASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Rprl1-201ENSMUST00000158050 327 ntBASIC12.51□□□□□ -0.41
Trim6Q8BGE7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Gm5706-201ENSMUST00000181525 993 ntBASIC12.51□□□□□ -0.41
Trim6Q8BGE7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim6Q8BGE7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Gm10434-201ENSMUST00000101158 471 ntBASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Gm15610-201ENSMUST00000120584 195 ntBASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Gm14247-201ENSMUST00000120950 237 ntBASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms