Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm13456-201ENSMUST00000118928 1365 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm14630-201ENSMUST00000118057 246 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm8815-201ENSMUST00000173809 620 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm9523-201ENSMUST00000199146 1159 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm43811-201ENSMUST00000202862 695 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm38145-201ENSMUST00000192319 693 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm37365-201ENSMUST00000193109 409 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm37826-201ENSMUST00000195329 322 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 AC137871.1-201ENSMUST00000228278 475 ntBASIC9.98□□□□□ -0.81
Rif1Q6PR54 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Rif1Q6PR54 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm23912-201ENSMUST00000104687 87 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm14633-201ENSMUST00000121152 470 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm43380-201ENSMUST00000200421 220 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm45225-201ENSMUST00000206852 1139 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm44658-201ENSMUST00000207965 637 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm5040-201ENSMUST00000218609 800 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm8618-201ENSMUST00000097570 432 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms