Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.65□□□□□ -0.22
Nup98Q6PFD9 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Gm7525-201ENSMUST00000219425 454 ntBASIC13.65□□□□□ -0.22
Nup98Q6PFD9 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.65□□□□□ -0.22
Nup98Q6PFD9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup98Q6PFD9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Nup98Q6PFD9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nup98Q6PFD9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.64□□□□□ -0.23
Nup98Q6PFD9 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nup98Q6PFD9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.63□□□□□ -0.23
Nup98Q6PFD9 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Gm19246-201ENSMUST00000173599 255 ntBASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup98Q6PFD9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm18035-201ENSMUST00000211962 589 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm6390-201ENSMUST00000215034 589 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Id2-203ENSMUST00000222667 958 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm4604-201ENSMUST00000025040 390 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms