Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Snrnp40Q6PE01 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm11560-201ENSMUST00000117567 948 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm7541-201ENSMUST00000118361 535 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm24248-201ENSMUST00000157321 322 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm18201-201ENSMUST00000174735 875 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm30671-201ENSMUST00000214898 318 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Snrnp40Q6PE01 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm12247-201ENSMUST00000117585 670 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm11354-201ENSMUST00000121974 422 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm19587-201ENSMUST00000191395 545 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm42779-201ENSMUST00000198807 406 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 335 ms