Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ParpbpQ6IRT3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
ParpbpQ6IRT3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
ParpbpQ6IRT3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm5706-201ENSMUST00000181525 993 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm29199-201ENSMUST00000187766 775 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm21156-201ENSMUST00000189693 869 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm4607-201ENSMUST00000206649 577 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm18056-201ENSMUST00000207670 568 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm18061-201ENSMUST00000208350 562 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm18063-201ENSMUST00000208529 568 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm18052-201ENSMUST00000208750 559 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm8913-201ENSMUST00000209491 641 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm5455-201ENSMUST00000058710 715 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ParpbpQ6IRT3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm12036-201ENSMUST00000120008 530 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm29615-201ENSMUST00000185371 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm28224-201ENSMUST00000186078 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm29001-201ENSMUST00000186177 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm28292-201ENSMUST00000186593 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm28101-201ENSMUST00000187608 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm29076-201ENSMUST00000187689 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm28302-201ENSMUST00000187931 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm28646-201ENSMUST00000188220 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm28205-201ENSMUST00000189177 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm29032-201ENSMUST00000189797 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm28695-201ENSMUST00000190300 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm37448-201ENSMUST00000192795 697 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Gm9136-201ENSMUST00000193368 454 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ParpbpQ6IRT3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms