Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
AtmQ62388 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
AtmQ62388 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.85□□□□□ -0.67
AtmQ62388 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Gm9369-201ENSMUST00000196009 733 ntBASIC10.84□□□□□ -0.67
AtmQ62388 Gm18001-201ENSMUST00000212023 688 ntBASIC10.84□□□□□ -0.67
AtmQ62388 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.84□□□□□ -0.67
AtmQ62388 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.84□□□□□ -0.67
AtmQ62388 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
AtmQ62388 Gm25343-201ENSMUST00000157460 107 ntBASIC10.84□□□□□ -0.67
AtmQ62388 Mir3091-201ENSMUST00000175086 76 ntBASIC10.84□□□□□ -0.67
AtmQ62388 Gm20091-201ENSMUST00000179683 189 ntBASIC10.84□□□□□ -0.67
AtmQ62388 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
AtmQ62388 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.84□□□□□ -0.67
AtmQ62388 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
AtmQ62388 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
AtmQ62388 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
AtmQ62388 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
AtmQ62388 Gm11540-201ENSMUST00000117457 780 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Gm15373-201ENSMUST00000121495 214 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Gm11993-201ENSMUST00000121861 820 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Gm23694-201ENSMUST00000179335 110 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.83□□□□□ -0.68
AtmQ62388 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.83□□□□□ -0.68
AtmQ62388 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
AtmQ62388 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
AtmQ62388 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Gm27440-201ENSMUST00000184785 107 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.83□□□□□ -0.68
AtmQ62388 Gm31274-201ENSMUST00000197356 229 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.83□□□□□ -0.68
AtmQ62388 Gm3635-201ENSMUST00000212314 354 ntBASIC10.83□□□□□ -0.68
AtmQ62388 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
AtmQ62388 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
AtmQ62388 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
AtmQ62388 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
AtmQ62388 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
AtmQ62388 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.83□□□□□ -0.68
AtmQ62388 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC10.83□□□□□ -0.68
AtmQ62388 Gm15197-201ENSMUST00000120526 478 ntBASIC10.83□□□□□ -0.68
AtmQ62388 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC10.83□□□□□ -0.68
AtmQ62388 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtmQ62388 Gm20781-201ENSMUST00000193154 693 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms