Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm7741-201ENSMUST00000181445 989 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC10.72□□□□□ -0.69
VcanQ62059 Gm5468-202ENSMUST00000227851 682 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Gm23458-201ENSMUST00000083257 169 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.72□□□□□ -0.69
VcanQ62059 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC10.72□□□□□ -0.69
VcanQ62059 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.72□□□□□ -0.69
VcanQ62059 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC10.72□□□□□ -0.69
VcanQ62059 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
VcanQ62059 Gm15197-201ENSMUST00000120526 478 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Gm22662-201ENSMUST00000175290 256 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Gm37009-201ENSMUST00000193297 361 ntBASIC10.72□□□□□ -0.69
VcanQ62059 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
VcanQ62059 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.72□□□□□ -0.69
VcanQ62059 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
VcanQ62059 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.72□□□□□ -0.69
VcanQ62059 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC10.72□□□□□ -0.69
VcanQ62059 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
VcanQ62059 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
VcanQ62059 Gm14699-201ENSMUST00000122340 228 ntBASIC10.71□□□□□ -0.69
VcanQ62059 Gm5808-201ENSMUST00000178090 357 ntBASIC10.71□□□□□ -0.69
VcanQ62059 Gm44304-201ENSMUST00000200509 145 ntBASIC10.71□□□□□ -0.69
VcanQ62059 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Gm38246-201ENSMUST00000194318 1511 ntBASIC10.71□□□□□ -0.69
VcanQ62059 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
VcanQ62059 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.71□□□□□ -0.69
VcanQ62059 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
VcanQ62059 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.71□□□□□ -0.69
VcanQ62059 Gm9369-201ENSMUST00000196009 733 ntBASIC10.71□□□□□ -0.69
VcanQ62059 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.71□□□□□ -0.69
VcanQ62059 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
VcanQ62059 AC164978.2-201ENSMUST00000226645 857 ntBASIC10.71□□□□□ -0.69
VcanQ62059 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
VcanQ62059 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
VcanQ62059 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.71□□□□□ -0.7
VcanQ62059 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
VcanQ62059 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VcanQ62059 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.71□□□□□ -0.7
VcanQ62059 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
VcanQ62059 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VcanQ62059 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VcanQ62059 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VcanQ62059 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
VcanQ62059 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VcanQ62059 Mir704-201ENSMUST00000102106 77 ntBASIC10.71□□□□□ -0.7
VcanQ62059 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.71□□□□□ -0.7
VcanQ62059 Gm42687-201ENSMUST00000199075 164 ntBASIC10.71□□□□□ -0.7
VcanQ62059 Zfp389-202ENSMUST00000224437 1234 ntBASIC10.71□□□□□ -0.7
VcanQ62059 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
VcanQ62059 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VcanQ62059 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
VcanQ62059 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.7
VcanQ62059 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VcanQ62059 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VcanQ62059 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VcanQ62059 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VcanQ62059 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VcanQ62059 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
VcanQ62059 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VcanQ62059 Gm16560-201ENSMUST00000159115 404 ntBASIC10.7□□□□□ -0.7
VcanQ62059 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms