Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm14263-201ENSMUST00000117955 746 ntBASIC12.25□□□□□ -0.45
Smarcd1Q61466 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm10807-201ENSMUST00000177134 795 ntBASIC12.25□□□□□ -0.45
Smarcd1Q61466 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm44506-201ENSMUST00000206278 965 ntBASIC12.25□□□□□ -0.45
Smarcd1Q61466 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.25□□□□□ -0.45
Smarcd1Q61466 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.25□□□□□ -0.45
Smarcd1Q61466 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.25□□□□□ -0.45
Smarcd1Q61466 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcd1Q61466 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm15352-201ENSMUST00000118696 270 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm15573-201ENSMUST00000119487 540 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm24844-201ENSMUST00000158679 127 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm9550-201ENSMUST00000161130 862 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm8459-201ENSMUST00000162504 760 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm38314-201ENSMUST00000195709 625 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm45118-201ENSMUST00000208928 825 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smarcd1Q61466 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd1Q61466 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms