Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm15953-201ENSMUST00000117656 1732 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm42449-201ENSMUST00000200349 2258 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm12151-201ENSMUST00000121374 290 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Ap1g1-206ENSMUST00000179104 1096 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Mir7654-201ENSMUST00000185082 70 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm44069-201ENSMUST00000204898 506 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm20949-201ENSMUST00000206478 952 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 AC124732.1-201ENSMUST00000221551 910 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 AC125409.1-201ENSMUST00000223213 3370 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm18630-201ENSMUST00000222109 1397 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm16387-201ENSMUST00000180990 2632 ntBASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm12341-201ENSMUST00000119724 503 ntBASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm6152-201ENSMUST00000151704 340 ntBASIC8.82□□□□□ -1
Trav3-3Q5R1C3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm42612-201ENSMUST00000197986 623 ntBASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm43170-201ENSMUST00000199827 612 ntBASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms