Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim63Q38HM4 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gm2810-201ENSMUST00000118681 990 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gm12291-201ENSMUST00000121627 311 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Rpph1-201ENSMUST00000175096 319 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Mir339-201ENSMUST00000083659 96 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim63Q38HM4 AC154186.1-201ENSMUST00000227711 1597 ntBASIC9.63□□□□□ -0.87
Trim63Q38HM4 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Trim63Q38HM4 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.62□□□□□ -0.87
Trim63Q38HM4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.62□□□□□ -0.87
Trim63Q38HM4 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gm15398-202ENSMUST00000219998 1477 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Mir8098-201ENSMUST00000184011 137 ntBASIC9.62□□□□□ -0.87
Trim63Q38HM4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gm6458-201ENSMUST00000211573 635 ntBASIC9.62□□□□□ -0.87
Trim63Q38HM4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.62□□□□□ -0.87
Trim63Q38HM4 Dupd1-202ENSMUST00000224735 548 ntBASIC9.62□□□□□ -0.87
Trim63Q38HM4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms