Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col19a1Q0VF58 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col19a1Q0VF58 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col19a1Q0VF58 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col19a1Q0VF58 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col19a1Q0VF58 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col19a1Q0VF58 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.52□□□□□ -0.41
Col19a1Q0VF58 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Gm23595-201ENSMUST00000104306 130 ntBASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Gm15374-201ENSMUST00000119313 844 ntBASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.51□□□□□ -0.41
Col19a1Q0VF58 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col19a1Q0VF58 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gm13624-201ENSMUST00000120263 462 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gm15815-201ENSMUST00000120569 255 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gm9372-201ENSMUST00000168454 430 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gm44323-201ENSMUST00000198689 129 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gm6478-201ENSMUST00000099450 742 ntBASIC12.5□□□□□ -0.41
Col19a1Q0VF58 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col19a1Q0VF58 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Col19a1Q0VF58 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms