Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm45575-201ENSMUST00000210283 548 ntBASIC12.37□□□□□ -0.43
Cntn3Q07409 Gm2553-201ENSMUST00000215986 605 ntBASIC12.37□□□□□ -0.43
Cntn3Q07409 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cntn3Q07409 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.37□□□□□ -0.43
Cntn3Q07409 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Cntn3Q07409 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.37□□□□□ -0.43
Cntn3Q07409 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.37□□□□□ -0.43
Cntn3Q07409 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cntn3Q07409 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm25116-201ENSMUST00000157191 122 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm8815-201ENSMUST00000173809 620 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm4310-201ENSMUST00000177847 889 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cntn3Q07409 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.36□□□□□ -0.43
Cntn3Q07409 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn3Q07409 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cntn3Q07409 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.35□□□□□ -0.43
Cntn3Q07409 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.35□□□□□ -0.43
Cntn3Q07409 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Gm13263-201ENSMUST00000121271 838 ntBASIC12.35□□□□□ -0.43
Cntn3Q07409 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.35□□□□□ -0.43
Cntn3Q07409 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.35□□□□□ -0.43
Cntn3Q07409 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.35□□□□□ -0.43
Cntn3Q07409 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Cntn3Q07409 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cntn3Q07409 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms