Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Sox9Q04887 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.2□□□□□ -0.46
Sox9Q04887 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox9Q04887 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Sox9Q04887 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.2□□□□□ -0.46
Sox9Q04887 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox9Q04887 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox9Q04887 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox9Q04887 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox9Q04887 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox9Q04887 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox9Q04887 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox9Q04887 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Sox9Q04887 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox9Q04887 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox9Q04887 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.2□□□□□ -0.46
Sox9Q04887 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox9Q04887 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox9Q04887 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Sox9Q04887 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox9Q04887 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox9Q04887 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox9Q04887 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox9Q04887 Gm13204-201ENSMUST00000120110 821 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Gm12791-201ENSMUST00000120788 655 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Gm16459-201ENSMUST00000121443 686 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox9Q04887 Gm25830-201ENSMUST00000158923 132 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Gm24809-201ENSMUST00000175318 271 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Gm39288-201ENSMUST00000210554 446 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox9Q04887 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Sox9Q04887 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Sox9Q04887 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox9Q04887 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.19□□□□□ -0.46
Sox9Q04887 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox9Q04887 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.18□□□□□ -0.46
Sox9Q04887 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox9Q04887 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox9Q04887 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms