Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm8956-201ENSMUST00000203939 825 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm807-202ENSMUST00000224929 408 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.16□□□□□ -0.62
Cxcr5Q04683 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm13297-201ENSMUST00000120205 934 ntBASIC11.16□□□□□ -0.62
Cxcr5Q04683 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm15547-201ENSMUST00000122152 333 ntBASIC11.16□□□□□ -0.62
Cxcr5Q04683 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm29396-201ENSMUST00000185659 716 ntBASIC11.16□□□□□ -0.62
Cxcr5Q04683 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm19187-201ENSMUST00000206781 892 ntBASIC11.16□□□□□ -0.62
Cxcr5Q04683 Gm45880-201ENSMUST00000213041 853 ntBASIC11.16□□□□□ -0.62
Cxcr5Q04683 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cxcr5Q04683 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.16□□□□□ -0.62
Cxcr5Q04683 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcr5Q04683 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcr5Q04683 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcr5Q04683 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcr5Q04683 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.15□□□□□ -0.62
Cxcr5Q04683 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcr5Q04683 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcr5Q04683 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcr5Q04683 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.15□□□□□ -0.62
Cxcr5Q04683 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.15□□□□□ -0.62
Cxcr5Q04683 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcr5Q04683 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 190 ms