Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
SgcbP82349 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.55□□□□□ -0.72
SgcbP82349 Gm23200-201ENSMUST00000104379 132 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SgcbP82349 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Gm11663-201ENSMUST00000117888 290 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Gm15004-201ENSMUST00000119192 630 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.55□□□□□ -0.72
SgcbP82349 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.55□□□□□ -0.72
SgcbP82349 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.55□□□□□ -0.72
SgcbP82349 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Gm10288-201ENSMUST00000084614 537 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SgcbP82349 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.55□□□□□ -0.72
SgcbP82349 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SgcbP82349 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.55□□□□□ -0.72
SgcbP82349 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
SgcbP82349 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Gm24891-201ENSMUST00000104391 136 ntBASIC10.54□□□□□ -0.72
SgcbP82349 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Gm11509-201ENSMUST00000117358 325 ntBASIC10.54□□□□□ -0.72
SgcbP82349 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.54□□□□□ -0.72
SgcbP82349 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Gm18734-201ENSMUST00000172937 808 ntBASIC10.54□□□□□ -0.72
SgcbP82349 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.54□□□□□ -0.72
SgcbP82349 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.54□□□□□ -0.72
SgcbP82349 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 AU022133-201ENSMUST00000200601 873 ntBASIC10.54□□□□□ -0.72
SgcbP82349 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.54□□□□□ -0.72
SgcbP82349 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SgcbP82349 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Map1b-203ENSMUST00000223725 2669 ntBASIC10.54□□□□□ -0.72
SgcbP82349 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SgcbP82349 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms