Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Usp9xP70398 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp9xP70398 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp9xP70398 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp9xP70398 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.72□□□□□ -0.85
Usp9xP70398 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Usp9xP70398 Gm4775-201ENSMUST00000169588 402 ntBASIC9.72□□□□□ -0.85
Usp9xP70398 Gm7211-201ENSMUST00000172692 1118 ntBASIC9.72□□□□□ -0.85
Usp9xP70398 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC9.72□□□□□ -0.85
Usp9xP70398 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.72□□□□□ -0.85
Usp9xP70398 AC152169.1-201ENSMUST00000223901 701 ntBASIC9.72□□□□□ -0.85
Usp9xP70398 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Usp9xP70398 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.72□□□□□ -0.85
Usp9xP70398 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 AC022682.1-201ENSMUST00000224624 2023 ntBASIC9.72□□□□□ -0.85
Usp9xP70398 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.72□□□□□ -0.85
Usp9xP70398 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.72□□□□□ -0.85
Usp9xP70398 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.72□□□□□ -0.85
Usp9xP70398 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC9.72□□□□□ -0.85
Usp9xP70398 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Usp9xP70398 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Usp9xP70398 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Usp9xP70398 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Usp9xP70398 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp9xP70398 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC9.72□□□□□ -0.85
Usp9xP70398 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Usp9xP70398 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Gm12418-201ENSMUST00000118116 942 ntBASIC9.71□□□□□ -0.85
Usp9xP70398 Gm15707-201ENSMUST00000118804 996 ntBASIC9.71□□□□□ -0.85
Usp9xP70398 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC9.71□□□□□ -0.85
Usp9xP70398 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Usp9xP70398 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC9.71□□□□□ -0.85
Usp9xP70398 Mir8093-201ENSMUST00000185043 137 ntBASIC9.71□□□□□ -0.85
Usp9xP70398 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Gm30055-201ENSMUST00000203175 803 ntBASIC9.71□□□□□ -0.85
Usp9xP70398 Gm18035-201ENSMUST00000211962 589 ntBASIC9.71□□□□□ -0.85
Usp9xP70398 AC156790.2-201ENSMUST00000227115 568 ntBASIC9.71□□□□□ -0.85
Usp9xP70398 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Usp9xP70398 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Usp9xP70398 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC9.71□□□□□ -0.85
Usp9xP70398 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Usp9xP70398 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC9.71□□□□□ -0.85
Usp9xP70398 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Usp9xP70398 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Usp9xP70398 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp9xP70398 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.71□□□□□ -0.85
Usp9xP70398 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.71□□□□□ -0.85
Usp9xP70398 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Usp9xP70398 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Usp9xP70398 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp9xP70398 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp9xP70398 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp9xP70398 Gm17931-201ENSMUST00000208132 634 ntBASIC9.71□□□□□ -0.86
Usp9xP70398 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Usp9xP70398 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms